Select format
Please zip all the files into one *.zip file.


    
       The *.tsv file MUST contain 6 columns (icgc_donor_id or smaple, chromosome, chromosome_start,chromosome_end, reference_genome_allele, mutated_to_allele) and separated by TAB ( \t ).(You can use your sanple id in icgc_donor_id)

    
       The *.maf file MUST contain 6 columns (Chromosome,Start_Position,End_Position,
       Reference_Allele,Tumor_Seq_Allele2,Tumor_Sample_Barcode) and separated by TAB (\t).(You can use your smaple id in Tumor_Sample_Barcode)



    


    


Variant file (Max size: 200 MB):
    Results will be maintained for a month.

    
    





Clinical information (optional):
    

Retrieve Job









Demonstration
(~10 minutes running time for each demo case)

Description Genome_Version File_Format Download Clinical File Run Demo
Oral Cancer hg19 .vcf Link Link run
ORCA-IN
(50samples)
hg19 .tsv(Custom) Link Link run
COAD-US
(10samples)
hg19 .maf Link Link run
    *ORCA-IN = Oral Cancer-India
    *COAD-US = Colon Adenocarcinoma-US